Postdoc In Computational Spatial Genomics - (22000087)

Universities and Institutes of Italy
December 31, 2022
Contact:N/A
Offerd Salary:Negotiation
Location:N/A
Working address:N/A
Contract Type:Other
Working Time:Negotigation
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  • Organisation/Company: ISTITUTO ITALIANO DI TECNOLOGIA
  • Research Field: Neurosciences
  • Researcher Profile: First Stage Researcher (R1)
  • Application Deadline: 31/12/2022 23:00 - Europe/Brussels
  • Location: Italy › GENOVA
  • Type Of Contract: Other
  • Job Status: Other
  • Project: Investigating genome structural variability at the nanoscale

    Commitment & contract: Postdoctoral position, 1 year collaboration contract (renewable)

    Location: CHT, Genova

    WHO WE ARE

    At IIT we work enthusiastically to develop human-centered Science and Technology to tackle some of the most pressing societal challenges of our times and transfer these technologies to the production system and society. Our Genoa headquarter is strictly inter-connected with our 11 centers around Italy and two outer-stations based in the US for a truly interdisciplinary experience.

    YOUR TEAM

    The Integrative Nuclear Architecture Research Line is coordinated by Dr. Irene Farabella, who has extensive experience in integrative modelling, imagining data analysis and 3D genomics.

    The Research Line focuses on integrating imaging techniques, genomic data, structural bioinformatics, and physical theories to investigate the 3D genome organization plasticity and how multiple components of the nucleus influence gene regulation information across scales.

    For more information visit: https: // www. iit.it/it/web/integrative-nuclear- architecture

    Within the team, the postdoctoral position focuses on:

  • Development of new methods for the analysis and modelling of genome imaging data (as sequential OligoSTORM- Nir,Farabella PlosGen 2018-). Methods range from statistical to computational tools, including machine- learning, to better understand the contribution of 3D genome structural variation patterns to genome function and regulation.
  • Interact with external and internal collaborators to evaluate and validate the implemented methods, models and predictions using experiments.
  • We expect all code produced in this project to be developed in Python, released as fully open source and made publicly available to the research community.
  • The position will be fully funded by the Giovanni Armenise Harvard Foundation within the project: “Investigating genome structural variability at the nanoscale”.

    ESSENTIAL REQUIREMENTS

  • A PhD in Mathematics, Biology, Computer Science, Machine Learning, Bioinformatics, Statistics, Computational Biology, Theoretical Physics, Genetics, Biotechnology or other relevant fields (or you are close of finishing your PhD).
  • Experience in data analysis, modeling, and/or statistics
  • Fluent programming skill in Python
  • The ability to properly report, organize and publish research data
  • Good command in spoken and written English
  • Strong communication skills, both presentations and verbal
  • Experience working in a team-oriented environment
  • Able to work independently, to manage your time and work to deadlines
  • ADDITIONAL SKILLS

  • Experience in technologies related to the study of genome structures
  • Experience with state-of-the-art algorithms for image processing and analysis.
  • Knowledge of molecular dynamic simulations and optimization modelling
  • Experience using deep learning libraries such as scikit-learn, pytorch, and tensorflow.
  • Knowledge of version control systems (e.g., GitHub) and/or container systems (e.g. Docker, Singularity)
  • Good communication skills
  • A strong publication records
  • Strong problem-solving attitude
  • High motivation to learn
  • Spirit of innovation and creativity
  • Good in time and priority management
  • Ability to work in a challenging and international environment
  • Documented experience in coaching junior scientists
  • Ability to work independently and collaboratively in a highly interdisciplinary environment
  • COMPENSATION & BENEFITS

  • Competitive salary package for international standards
  • Private health care coverage
  • Wide range of staff discounts
  • Candidates from abroad or Italian citizens who permanently work abroad and meet specific requirements, may be entitled to a deduction from taxable income of up to 90% from 6 to 13 years.
  • WHAT'S IN FOR YOU?

  • An equal, inclusive and multicultural environment ready to welcome you with open arms. Discrimination is a big NO for us!
  • We like contamination and encourage you to mingle and discover what other people are up to in our labs!
  • If paperwork is not your piece of cake, we got you! There's a specialized team working to help you with that, especially during your relocation!

  • If you are a startupper or a business-minded person, you will find some exceptionally gifted professionals ready to nurture and guide your attitude and aspirations.

  • If you want your work to have a real impact, in IIT you will find an innovative and stimulating culture that drives our mission to contribute to the improvement and well-being of society!
  • We stick to our values! Integrity, courage, societal responsibility and inclusivity are the values we believe in! They define us and our actions in our everyday life. They guide us to accomplish IIT mission!
  • If you feel these tickles your appetite for change, do not hesitate and apply!

    Please submit your application using the online form and including:

  • a detailed CV
  • a brief cover letter (outlining motivation, experience, and qualifications) addressed to Dr. Irene Farabella
  • contact details of at least 2 referees.
  • Application's deadline: December 31, 2022.

    We inform you that the information you provide will be used solely for the purposes of evaluating and selecting professional profiles in order to meet the requirements of Istituto Italiano di Tecnologia.

    Your data will be processed by Istituto Italiano di Tecnologia, based in Genoa, Via Morego 30, acting as Data Controller, in compliance with the rules on protection of personal data, including those related to data security.

    Please also note that, pursuant to articles 15 et. seq. of European Regulation no. 679/2016 (General Data Protection Regulation), you may exercise your rights at any time by contacting the Data Protection Officer (phone Tel: +39 010 28961 - email: [email protected] ).

    Contact Information
  • Organisation/Company: ISTITUTO ITALIANO DI TECNOLOGIA
  • Department: Integrative Nuclear Architecture
  • Organisation Type: Research Laboratory
  • Website: https: // www. iit.it/it/openings
  • E-Mail: [email protected]
  • Country: Italy
  • City: GENOVA
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