Computational Bacterial Population Genomicist

University of Nebaraska-Lincoln

United States

November 1, 2021


Position Information Working Title Computational Bacterial Population Genomicist

Department Food Science & Technology-0836 Requisition Number F210124 Posting Open Date 09/10/2021 Application Review Date: (To ensure consideration, please submit all application materials before review date) 11/01/2021 Posting Close Date Open Until Filled Yes Description of Work

The University of Nebraska-Lincoln Department of Food Science and Technology is seeking a Computational Bacterial Population Genomicist at the rank of Research Assistant Professor with outstanding computational skills to develop a multi-disciplinary program in Food Safety that emphasizes evolution and ecology of pathogens and non-pathogens in food production environments. The research program will serve as a hub for collaboration with faculty in the department of Food Science and Technology, the Nebraska Food for Health Center (NFHC), University of Nebraska Medical Center (UNMC), the Nebraska Public Health Laboratory (NPHL), and Nebraska One Health program. In particular, the incumbent will be expected to lead development and implementation of bioinformatics programs and pipelines that use high-performance computing for population genomics analysis of whole genome sequencing data and metagenomic data and to leverage these platforms/pipelines for large-scale research projects in collaborative research teams with FDST, NFHC, UNMC, NPHL, and Nebraska One Health, targeting food safety and gastrointestinal wellness. This position will facilitate seeking strategic federal and private funding for research in the specific area of One Health focused on the emerging problem of zoonotic bacterial antimicrobial resistance. These working groups led by the RAP will facilitate effective participation of UNL in the National Institute for Antimicrobial Resistance Research and Education; will facilitate strong collaborations with relevant agencies (e.g., USDA Food Safety Inspection Service) to leverage ongoing regulatory surveillance; and will facilitate collaborations of NFHC and programs at UNMC and NPHL.

This position is fully focused on research. Specific duties are:

  • Develop a multi-disciplinary research program at the intersection between data science, microbiology, and microbial population genomics with Public Health applications.
  • Leverage the ProkEvo platform to develop strong collaborations with regulatory agencies (e.g., USDA Food Safety Inspection Service) to promote exchange of data and integration of population genomics into ongoing regulatory testing.
  • Integrate agriculture (livestock industry) and Public Health applications to aid in achieving Nebraska One Health goals.
  • Seek independent funding through governmental institutes (NSF, USDA, and NIH), and private foundations.
  • Recognizing that diversity within a context of inclusivity enhances creativity, innovation, impact, and a sense of belonging, the Institute of Agriculture and Natural Resources (IANR) and the Food Science and Technology Department are committed to creating learning, research, extension programming, and work environments that are inclusive of all forms of human diversity. We actively encourage applications from and nominations of qualified individuals from underrepresented groups including racial and ethnic minorities, women, sexual minorities, persons living with disabilities, and veterans.

    As an EO/AA employer, qualified applicants are considered for employment without regard to race, color, ethnicity, national origin, sex, pregnancy, sexual orientation, gender identity, religion, disability, age, genetic information, veteran status, marital status, and/or political affiliation. See https:// www.

    Minimum Required Qualifications

  • Doctor in Veterinary Medicine with PhD in microbiology, food science or similar field.
  • Formal training in statistics/data science.
  • Peer-reviewed scholarly publications in microbiome science and microbial population genomics.
  • Preferred Qualifications

  • Three years of training beyond the doctorate in bacterial population genomics.
  • Minor in statistics or other relevant data science.
  • Pre-Placement Driving Record Review Required Criminal History Background Check Required Posted Salary How to Apply

    Click “Apply to this job” and complete the information form. Attach the following documents:

  • A letter of interest that describes your qualifications for the job and anticipated contributions
  • Your curriculum vitae
  • Contact information for three professional references
  • Statements that describe your philosophy and approach to research and engagement with stakeholders
  • A statement of the value you place on diversity and your anticipated contributions to creating inclusive environments in which every person and every interaction matters (two page maximum).
  • Combine statements (items 4 and 5 above) into a single document and attach as “Other Document.”

    For questions or accommodations related to this position contact

    Karen Randall

    Job Category Job Category (old) Faculty Non-Tenure Leading Job Type 12 Month (Faculty Only) Position funded by grant or other form of temporary funding? No If Temporary, indicate end date Planned Hire Date Appointment End Date

    Supplemental Questions

    Required fields are indicated with an asterisk ().

    Required Documents

    Required Documents

  • Letter of Interest
  • Curriculum Vitae
  • List of References
  • Other Document
  • Optional Documents

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